Podcast

The Genetics Podcast

Natural Sciences, Science

Exploring all things genetics. Dr Patrick Short, University of Cambridge alumnus and CEO of Sano Genetics, analyses the science, interviews the experts, and discusses the latest findings and breakthroughs in genetic research. To find out more about Sano Genetics and its mission to accelerate the future of precision medicine visit: www.sanogenetics.com

Natural Sciences chart
#56
Episodes
263
Releases
Weekly
Typical length
40 min
On air since
2019
Latest episode
5 days ago

Episodes

263 episodes, newest first

  1. EP 263: Bringing the first cardiovascular gene editing therapy to patients with Sek Kathiresan of Eli Lilly

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Sek Kathiresan, CEO of Verve Therapeutics and SVP, Head of Obesity Research and Early Development at Eli Lilly. They discuss how protective genetic variants led to the development of a one-time gene editing therapy for heart disease in the face of early doubt, the phase one results for Verve-102, what recent trial failures mean for genetic target validation, and the unmet needs in obesity treatment.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Sek

    01:40 Sek’s family history of heart disease and how it motivated him to pursue cardio therapeutics

    03:29 Sek’s background and research on the genetics of coronary artery disease and protective mutations

    08:03 Reactions to the Verve launch and the biological, technological, regulatory, and commercial risks

    11:00 Verve-102 phase one results and the case for lifelong LDL lowering

    16:14 Why cumulative exposure means lowering LDL earlier and for longer

    17:53 Recent trial failures in genetically validated targets and what the Lp(a) trial leaves unanswered

    20:33 Polygenic risk scores and who benefits most from LDL lowering

    23:36 Sek’s new role at Lilly and the remaining unmet needs in obesity treatment

    29:06 Whether one-time gene therapy could work for obesity and how GLP-1 drugs drive weight loss

    30:38 Food intake, energy expenditure, and the search for new obesity mechanisms

    32:15 Why Lilly is investing so heavily in genetic medicine

    34:35 Closing remarks

    Find out more

    •

    ANGPTL3 study in NEJM (https://pmc.ncbi.nlm.nih.gov/articles/PMC3008575/)

    •

    Verve-102 study (https://www.nejm.org/doi/10.1056/NEJMoa2601283)

    36 min
  2. EP 262: The genetic drivers of hemochromatosis, drug response, and multimorbidity with Luke Pilling of the University of Exeter

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Luke Pilling, Senior Lecturer in Genetic Epidemiology at the University of Exeter. They discuss hemochromatosis and the case for earlier diagnosis, and the genetic drivers of multimorbidity, pharmacogenetics, and drug response.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Luke

    01:37 An overview of HFE hemochromatosis and why diagnosis is delayed

    04:24 Iron levels and overload risk in heterozygous and compound heterozygous carriers

    05:51 Aging-related effects seen in homozygotes

    06:43 How hemochromatosis is currently diagnosed and detected in the UK

    09:26 Future screening and case finding, including the Our Future Health cohort

    11:28 Genetic and environmental factors that shape outcomes in C282Y homozygotes

    13:28 The GEMINI project and the genetic drivers of multimorbidity

    15:56 Drug targets from multimorbidity genetics, including repurposing and opposite effects

    18:49 Using disease sequences in health records to look for earlier intervention points in multimorbidity

    21:21 Data gaps limiting multimorbidity research, from primary care records to proteomics

    23:17 Handling misdiagnosis and clinical code accuracy in health record research

    24:55 International collaborations and the need for more diverse biobank data

    26:08 Pharmacogenetics research and how genetic variants shape drug response

    29:04 Limited clinical examples of pharmacogenetics and lessons from non-responders

    33:08 Genetics of lifespan and healthy aging, and why geroscience pathways rarely appear in GWAS

    36:06 Luke’s future research focuses

    40:39 Closing remarks

    Find out more:

    - Hereditary hemochromatosis study

    - Multimorbidity study

    - Pharmacogenetics framework study

    39 min
  3. EP 261: Inside the virtual biotech staffed by AI agents with James Zou of Stanford University

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. James Zou, Associate Professor of Biomedical Data Science at Stanford University. They discuss the concept of virtual biotechs and how AI agents link single cell data to clinical trial success, Paper to Agent and turning papers into living virtual authors, clinical AI from EchoNet to SleepFM, and the role of academia alongside big AI labs.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to James

    01:55 An overview of James’s virtual biotech and its AI scientist agents

    04:11 How single cell evidence behind drug targets predicts clinical trial success

    06:33 Behind the scenes of how autonomous the virtual biotech agents are

    08:06 Missing proprietary trial data as the next gap for the virtual biotech

    09:44 Scaling the number of collaborating AI agents as a new frontier for drug discovery

    12:29 How teamwork and structure evolved among the agents

    15:53 Behind the idea of Paper to Agent and virtual authors

    19:01 What converting over 100 papers into agents revealed about reproducibility

    23:14 The story behind EchoNet, an FDA-cleared AI tool for cardiac ultrasound

    26:28 Predicting risk for over 100 future diseases from one night of sleep

    27:40 Transferring SleepFM from sleep labs to consumer wearables

    28:43 Combining multimodal health data to predict disease

    30:10 Longitudinal blood proteomics as the biggest data gap for health AI

    31:18 The role of academia as an open, neutral counterweight to big AI labs

    32:51 How James’s path from Cambridge math and Harvard machine learning led to biology

    34:41 Closing remarks

    Find out more

    •

    Virtual biotech paper (https://www.science.org/doi/10.1126/science.aeg6779)

    •

    Paper2Agent paper (https://www.nature.com/articles/s41586-026-11044-y)

    36 min
  4. EP 260: How AI is reshaping genomics, disease prediction, and biosecurity with Jeffrey Barrett of the University of Helsinki

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Jeffrey Barrett, Group Leader at the Ellis Institute Finland and the University of Helsinki. They discuss using AI and federated biobank data to stratify common chronic diseases, how LLMs reading clinical notes in Finland's health registries can reveal treatment response, how AI is changing the way scientists research and train, and what the UK's COVID genome sequencing effort means for biosecurity.

    Show Notes

    0:00 Intro to The Genetics Podcast

    01:00 Welcome to Jeff

    02:08 Jeff's research focus for his new lab, including molecular subtyping of common chronic diseases with AI

    06:18 Barriers to pooling biobank data across research environments for federated AI models

    11:00 Why Jeff expects larger datasets to make complex models better at predicting disease

    13:34 The three disease areas Jeff's lab will target first: cardiometabolic, inflammatory and neuropsychiatric

    19:41 Using LLMs to read clinician notes in Finland's health registries for treatment response

    24:50 How Jeff uses AI in his research and where humans still need to read and review

    31:08 Using Claude to understand papers and the gaps in its literature searches

    32:14 Jeff on AI solving open problems in mathematics and biology, and where researchers fit

    35:48 Simultaneous discoveries and why lab data generation still needs experts

    39:01 Jeff's COVID genome sequencing at Sanger and what it means for AI and biosecurity

    43:16 Closing remarks

    45 min
  5. EP 259: A patient community driving awareness and research for Danon disease with Jenny Hsieh of the Danon Foundation

    Show notes

    Summary

    This week on The Genetics Podcast, Patrick is joined by Jenny Hsieh, Co-Founder and President of the Danon Foundation. They discuss how Danon disease affects males and females, why it is so often misdiagnosed, the current therapy landscape and research priorities, and how families can make informed decisions about gene therapy trials.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Jenny

    01:28 An overview of Danon disease

    02:34 Sex differences in Danon disease and severe disease in females

    05:15 Why Danon disease is misdiagnosed and how it may be spotted earlier

    08:50 Therapy pipeline for Danon and the Foundation's global patient coordination

    13:46 Origin story of the Danon Foundation

    18:10 Research priorities and the burden of Danon disease beyond the heart

    22:39 Raising genetic testing awareness among ophthalmologists and cardiologists for Danon disease

    25:20 Recognizing broader Danon symptoms and launching the first Danon Awareness Day

    29:37 Informed consent and trial literacy for families weighing gene therapy

    33:14 Patient-friendly trial experiences

    36:19 Ways to support Danon research

    37:37 Closing remarks

    Find out more

    •

    Danon Foundation

    39 min
  6. EP 258: The mutations hiding in healthy tissues with Inigo Martincorena of the Wellcome Sanger Institute

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Inigo Martincorena, Group Leader at the Wellcome Sanger Institute. They discuss the discovery of widespread cancer-driver mutations in normal tissue, the role of somatic mutations in autoimmune disease, new sequencing technologies transforming the field, and the therapeutic potential of targeting these mutations.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Inigo

    01:46 How Inigo's eyelid skin study revealed widespread cancer-driver mutations

    07:14 Findings from a follow-up study on esophageal tissue

    10:02 How NanoSeq technology scaled somatic mutation research across tissues

    12:34 The thyroid study linking somatic mutations to autoimmune disease

    17:07 How escaped B cell clones evolve into polyclonal autoimmune disease

    20:21 Immune gene mutations occurring in healthy aging lymphocytes

    21:21 Why driver mutation clones in normal tissue rarely become cancer

    24:16 Two therapeutic paradigms for targeting somatic mutations in disease

    28:13 Examples of somatic rescue mutations in the colon, liver, and blood

    29:20 Why clonal selection only occurs in dividing cell types

    31:20 The field's remaining blind spots in mobile immune cells and rare samples

    33:46 How new single-cell sequencing will link genotype to phenotype

    36:03 What Inigo has learned from collaborating across Sanger's expertise

    38:09 Closing remarks

    Find out more

    •

    Eyelid study

    •

    Esophagus study

    39 min
  7. EP 257: Managing hereditary cancer risk and medical uncertainty with Marleah Dean Kruzel of the University of South Florida

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Marleah Dean Kruzel, Professor of Communication at the University of South Florida. They discuss her personal path from watching breast cancer move through her family to testing positive for a hereditary mutation herself, the ART framework she developed for managing uncertainty, and the complexities of communicating genetic risk within families.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Marleah

    01:35 Marleah's family history of breast cancer across four generations

    02:48 Marleah's childhood living through her mother's five-year cancer battle

    04:26 Marleah's experience with genetic testing

    07:19 How a positive test result reshaped Marleah’s PhD research focus

    08:40 The central challenges of living with a positive test result

    10:50 The ART framework for managing hereditary cancer uncertainty

    15:06 Applying the ART framework to Patrick’s experience with uncertainty and the importance of having a support system

    19:53 Common misconceptions in how families communicate genetic risk

    23:54 The previvor identity and the chronic uncertainty it brings

    25:40 How Marleah has learned to accept and embrace uncertainty

    27:57 Balancing logic and emotion in hereditary cancer family planning

    31:28 How Marleah grounds her research tools in patients' lived experience

    33:21 How AI is eroding our capacity to sit with uncertainty

    35:57 Redesigning healthcare for a lifespan of genetic risk information

    38:10 Closing remarks

    39 min
  8. EP 256: Cutting through the AI hype in drug discovery with Dave Hallett of Recursion

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. David Hallett, Chief Scientific Officer at Recursion. They discuss the biggest shifts in drug discovery over Dave's three-decade career, where AI is genuinely transforming the field today versus where the hype outruns the reality, and how Recursion's perturbational maps have uncovered and validated a novel neurodegeneration target.

    Show Notes

    0:00 Intro to The Genetics Podcast

    01:00 Welcome to Dave

    01:57 The biggest shifts in drug discovery over three decades

    06:39 Where AI is delivering real wins across drug discovery today

    12:19 How AI-assisted trial simulation reveals which eligibility criteria to relax

    14:46 The three biggest reasons drug programs fail in the clinic

    18:20 How Recursion's perturbational maps uncover new drug targets

    24:58 A four-step framework for validating a novel drug target

    28:44 How Recursion balances deep therapeutic focus with partnership breadth

    30:52 Why AI can't shortcut clinical trials, and what proof of real impact looks like

    34:57 The skills scientists need most in the AI era, and why trusting AI outputs starts with trusting the data

    39:52 Closing remarks

    Find out more:

    •

    Recursion (https://www.recursion.com/)

    41 min
  9. EP 255: Turning long-read sequencing into a routine part of clinical care with Danny Miller of the University of Washington

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Danny Miller, Assistant Professor of Pediatrics and of Laboratory Medicine and Pathology at the University of Washington and Attending Physician at Seattle Children's Hospital. They discuss the case for making long-read sequencing the first genetic test every patient receives, the reference dataset his lab is building from the 1000 Genomes Project to resolve structural variants, publicly available methylation signatures as biomarkers for diagnosis and treatment response, and his vision for genome-informed care from newborn screening through the NICU.

    Show Notes

    0:00 Intro to The Genetics Podcast

    01:00 Welcome to Danny

    01:41 The case for long-read sequencing as first-line genetic testing

    02:52 Current barriers to wider use of long-read sequencing

    04:14 Building a long-read reference dataset from 1000 Genomes for variant filtering

    06:47 How long-read sequencing can solve a missed diagnosis

    08:12 The clinical case for complete telomere-to-telomere genomes

    10:39 What it will take to shift the clinical genetics status quo

    12:06 Making methylation signatures public to diagnose disease and track therapy

    15:58 Danny's path from programming and finance into clinical genetics

    18:19 Danny's lived experience with deafness and achondroplasia, and how it shapes his approach to genetic counseling

    21:46 Danny's optimism about AI in genomics and worry about AI in education

    27:15 The path to making genomes a routine part of the medical record

    29:47 The vision of same-day newborn genomic data guiding NICU treatment decisions

    34:31 Closing remarks

    Find out more:

    •

    Miller Lab (https://millerlaboratory.com/)

    37 min
  10. EP 254: Triangulating genetic evidence and dodging bias to pick winning drug targets with Brent Richards of 5 Prime Sciences

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Brent Richards, CEO and Founder of 5 Prime Sciences and Professor of Human Genetics, Epidemiology, and Medicine at McGill University. They discuss how to triangulate different types of genetic evidence to validate a drug target, why herd psychology often drives which targets get funded, why strong genetic support didn't save the Zeus IL-6 trial, and how collider bias can distort genetically stratified clinical trials.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Brent

    01:43 How company size shapes access to genetic drug discovery tools

    04:10 Brent's framework for triangulating different types of genetic evidence

    06:50 The herd psychology behind which drug targets get funded

    10:01 Potential reasons the Zeus IL-6 trial failed despite strong genetic evidence

    12:49 What a gold standard genetic evidence package actually looks like

    17:13 Closing the data gap with diverse genomes and systematic pipelines

    19:03 The diabetes patient story that drove Brent into drug development and balancing academia with industry

    25:39 Why obesity went from a drug development graveyard to its biggest frontier

    29:13 How collider bias can distort genetic risk trial results

    38:20 Where to go deeper on advanced genetic drug discovery concepts

    40:11 Closing remarks

    Find out more:

    •

    5PrimeSciences’ symposium on human genetics at ASHG2026 in October

    42 min
  11. EP 253: The genetics of brain size, growth, and aging with Andrew Jackson of the University of Edinburgh

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Andrew Jackson, Programme Leader at the MRC Human Genetics Unit at the University of Edinburgh. They discuss how his lab discovered that gain-of-function DNMT3A mutations cause both microcephalic dwarfism and an accelerated aging syndrome, and what that reveals about the shared biology of growth and aging.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Andrew

    01:34 The origins of Andrew's work linking brain size and aging

    02:54 The genetics of mammalian size range and epigenetic factors regulating growth

    05:02 How DNMT3A mutations causing dwarfism led to discovering an accelerated aging syndrome

    09:46 Cell number rather than cell size as the shared driver of growth and aging

    13:07 Whether brain size within humans actually predicts cognitive ability

    15:20 Why intellectual disability has far more known genes than dwarfism

    19:26 Discovering ribonuclease H2's role in DNA repair, and its unexpected link to cancer

    23:35 Why studying rare monogenic diseases reveals broader biology

    26:59 Andrew's next research questions on aging, cancer, and mutation biology

    28:42 Why humans, model organisms, and cell assays each have a role

    31:00 Somatic mosaicism's growing role in aging and disease beyond cancer

    36:11 Closing remarks

    Find out more:

    Mentioned studies from Andrew’s lab:

    •

    https://www.nature.com/articles/s41588-026-02633-8

    •

    https://www.nature.com/articles/s41588-018-0274-x

    37 min
  12. EP 252: The diagnosis that became a mission to cure rare disease: Advancing genetic medicine using AI with Stevie Ringel of Nome

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Stevie Ringel, co-founder of Nome and founder of the Kizuna Foundation. They discuss Stevie's own ultra-rare disease diagnosis and shaped his path to founding Kizuna Foundation and Nome, how Nome's AI agents help scientists navigate the operational complexity of small-batch drug development, the technical and business model advantages underpinning Nome's accuracy, and what it will take to build a sustainable funding model for ultra-rare disease.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Stevie

    01:37 Stevie's inherited retinal disease (IRD) diagnosis and subsequent path into genomics

    03:16 Why Stevie founded Kizuna Foundation and why ultra-rare drug development is so operationally complex

    06:27 The origin story of Nome and using AI to automate the operational work

    10:09 The inspiration for the name “Nome” and who the company is built to serve

    12:44 The biggest blockers to program speed

    15:07 How AI and scale can bring down the cost of gene therapy manufacturing

    18:01 FDA signals and global regulatory competition

    19:33 Priority review vouchers and why Nome stays out of molecule IP

    20:33 Nome's AI and review process for patient reports and its expansion to health systems

    25:04 Nome's agent architecture and the data behind its accuracy

    28:17 Why delivery remains gene therapy's biggest bottleneck and approaches for solving it

    31:34 The case for a new capital model in rare disease drug development

    33:25 What’s next for Nome as they advance preclinical programs

    34:25 Nome’s focus on process excellence across therapeutic modalities

    36:34 Closing remarks

    Find out more: Nome

    38 min
  13. EP 251: Cracking the delivery barrier in genetic medicine with Jagesh Shah of Mirai Bio

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Jagesh Shah, Chief Scientific Officer at Mirai Bio. They discuss why delivery is a central bottleneck holding back nucleic acid medicines, how Mirai's lipid nanoparticle (LNP) platform is built to reach tissues like adipocytes and T cells, and the machine learning feedback loop the company uses to engineer LNP formulations.

    Show Notes

    0:00 Intro to The Genetics Podcast

    01:00 Welcome to Jagesh

    01:40 Why delivery is the main bottleneck for gene therapies

    03:42 Easier vs harder tissues to target for delivery

    06:40 Overview of Mirai's modular delivery platform

    09:02 Comparing viral vectors and lipid nanoparticles (LNPs)

    12:18 Different approaches for targeting adipocytes and T cells with LNPs

    15:49 Mirai's machine learning (ML) feedback loop for optimizing LNP formulation

    20:50 Why lipid chemistry is still hard for ML to learn and factors affecting LNP tropism

    24:35 Jagesh's path from academia to Mirai

    27:23 Mirai's platform business model and how it lowers risk

    29:13 What industry partnerships with Mirai look like

    31:41 Mirai's next frontier of delivery to muscle tissue and the brain

    34:40 Cargo size and immunogenicity of LNPs vs AAV

    36:00 Why the field needs to close the regulatory pace gap

    37:19 Closing remarks

    Find out more:

    •

    Mirai Bio

    39 min
  14. EP 250: Redefining rare disease realities with Sharon Terry of the Genetic Alliance [Re-run]

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Sharon Terry, President & CEO of Genetic Alliance. They discuss how Sharon established a layperson-led biobank, her long-term work on rare diseases and patient advocacy, and her program to bring genetic technology to patients in low- to middle-income countries. We’re re-running this episode for its enduring lessons on patient advocacy, rare disease parenting, communication, and citizen science.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Sharon and a discussion of the personal experience with rare disease that started her journey

    03:47 Reasons Sharon decided to establish the first layperson-led biobank

    05:34 Challenges with setting up the biobank infrastructure

    07:00 Balancing financial factors in a non-profit organization

    09:30 Recent patterns and future insight into rare disease drug discovery framework and regulation

    15:32 Barriers to widespread collaboration and cooperation in rare disease research, and why it should be approached from a public health perspective

    18:12 Background and experiences from the iHope Genetic Health program in low- to middle-income countries

    24:44 Sharon’s perspective on challenges with the Genetic Information Non-discrimination Act

    28:49 Sharon’s lessons learned in her patient advocacy and policy work, and her hopes for future legislation

    33:04 Sharon’s hopes for improved access to genetic testing and treatment for children in underserved communities

    34:34 How Sharon learned about rare diseases and genetics as a “homeschooling mom without a degree”

    37:54 Insights into how elements of spirituality can support advocacy work

    40:18 Closing remarks

    42 min
  15. EP 249: Building the world's most detailed genetic map of inflammatory bowel disease with Carl Anderson of the Wellcome Sanger Institute

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Carl Anderson, Senior Group Leader and Head of the Human Genetics Programme at the Wellcome Sanger Institute, where he leads the Genomics of Inflammation and Immunity Group. They discuss IBDVerse, the single-cell atlas Carl's team built to map genetic effects on gene regulation across gut cell types, how coding and non-coding variants converge on shared biological pathways in inflammatory bowel disease, and Carl's vision for longitudinal multi-omics cohorts built around the sickest and most underrepresented hospital patients.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:58 Welcome to Carl

    02:05 The origins of IBDVerse and mapping genetic effects on gene regulation across gut cell types in IBD

    05:43 How anti-TNFs and newer genetically-supported IBD drugs have reshaped treatment

    08:04 Genetic versus environmental contributions to IBD

    09:53 Using single-cell data to uncover IBD disease subtypes

    13:22 Drug sequencing and immunogenicity in treatment response

    16:52 The backstory of building the IBDVerse atlas at scale

    20:29 How coding and non-coding IBD variants converge on the same genes and pathways

    23:38 The case for pathway-specific polygenic risk scores

    28:17 Building a longitudinal multi-omics dataset to predict IBD progression and drug response

    30:08 Why Sanger's next cohort targets sick and underrepresented patients rather than healthy volunteers

    34:07 What Carl looks for when interviewing PhD students and faculty candidates

    39:20 A call to junior scientists and closing remarks

    Find out more:

    •

    IBDverse study

    42 min
  16. EP 248: The blood mutations rewriting cardiovascular risk: Clonal hematopoiesis and polygenic risk with Pradeep Natarajan of Massachusetts General Hospital

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Pradeep Natarajan, Director of Preventive Cardiology at Massachusetts General Hospital and Associate Professor of Medicine at Harvard Medical School. They discuss the discovery of clonal hematopoiesis as a driver of cardiovascular disease, the inflammatory mechanisms and emerging therapies targeting it, the growing clinical case for polygenic risk scores, and Pradeep's upcoming move to lead cardiometabolic and human genetics research at Amgen.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Pradeep

    01:30 The origin story of clonal hematopoiesis (CH) as a cardiovascular risk factor

    09:41 CH mutations such as TET2 that are linked to cardiovascular disease

    12:27 Evidence tying inflammation to CH and drugs that could target it

    16:49 TenSixteen Bio’s strategy for targeting CH and the challenge of finding the right patients

    21:33 Trajectory of CH across age and somatic mosaicism beyond blood

    26:44 How polygenic risk scores fill a gap in cardiovascular risk prediction

    34:49 The future clinical applications of polygenic risk scores

    39:20 The challenge of standardizing polygenic risk scores for clinical and regulatory use

    42:27 Pradeep's move to pharmaceutical company Amgen and his reasons for it

    46:23 Closing remarks

    Find out more:

    •

    Clonal hematopoiesis paper

    48 min
  17. EP 247: Why neurons accumulate mutations like clockwork: Somatic mosaicism and neurodegeneration with Christopher Walsh of Boston Children's Hospital

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Christopher Walsh, Professor of Pediatrics and Neurology at Harvard Medical School, Chief of Genetics and Genomics at Boston Children's Hospital, and HHMI Investigator. They discuss his path from neurobiology to human genetics, how somatic mosaicism in the brain drives disease from epilepsy to Alzheimer's, and what this reveals about new therapeutic targets for neurodegeneration.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:59 Welcome to Chris

    01:18 Chris’ path from neurobiology to human genetics

    04:55 How collaboration and mentorship have shaped Chris' career

    06:59 Somatic mosaicism and genetic mutations in the brain, from epilepsy to Alzheimer’s

    13:56 Repurposing cancer therapeutics and targeting DNA damage as new approaches to Alzheimer's

    15:29 A shared pattern of DNA damage across neurodegenerative diseases and the mechanism behind it

    19:36 How healthy neurons accumulate mutations with age and what that means for the brain

    23:21 How mutation rates and patterns vary across cell types

    26:23 How genome quality control and synaptic pruning may explain both brain development and neurodegeneration

    30:33 Why some people maintain a healthy brain into old age

    33:57 Chris’ advice for early-career scientists on pursuing goals

    36:43 Closing remarks

    Find out more:

    https://walshlab.org/

    38 min
  18. EP 246: Turning a fatal diagnosis into a cure strategy: Accelerating C9orf72 ALS research with Yentli Soto Albrecht of CureC9

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Yentli Soto Albrecht, physician-scientist in training and founder of CureC9. They discuss how losing her father to C9orf72 ALS, and later learning her own genetic risk, reshaped the direction of her career. The conversation explores the biology linking the C9 repeat expansion to ALS and FTD, and how CureC9 is removing barriers across biomarkers, therapeutics, and patient samples to accelerate progress toward a cure.

    Show Notes

    0:00 Intro to The Genetics Podcast

    00:58 Welcome to Yentli

    02:34 How Yentli's father's C9 ALS diagnosis and her own genetic risk led her to pivot her research career toward curing it

    06:41 The biology of the C9orf72 repeat expansion and how TDP-43 dysregulation links it to ALS and FTD

    11:40 Therapeutic strategies targeting TDP-43 pathology in ALS and FTD

    15:35 The state of biomarkers for ALS and FTD, and why C9-FTD trials lag behind ALS

    22:08 How Yentli is lowering barriers for biomarker, cell line, and drug development through CureC9

    30:40 Call for collaborators and where to follow Yentli

    32:59 Closing remarks

    Find out more: CureC9

    34 min
  19. EP 245: Developing targeted therapies for ALS with Eric Green of Trace Neuroscience [Re-run]

    Show notes

    This week on The Genetics Podcast, we're re-airing our conversation with Eric Green, Founder and CEO of Trace Neuroscience, Co-Founder and Chief Scientific Officer at Maze Therapeutics, and Adjunct Clinical Assistant Professor at Stanford University School of Medicine. Patrick and Eric discuss Eric's transition from cardiology to entrepreneurship, the role of highly focused biotechs in creating precision therapies, and the development of high-impact gene therapies for people with amyotrophic lateral sclerosis (ALS). We're revisiting this episode following Trace Neuroscience's recent announcement that the first patient has been dosed with its antisense oligonucleotide (ASO) designed to restore UNC13A function in ALS.

    Show Notes

    0:00 Intro to The Genetics Podcast

    02:03 Welcome to Eric, his background in cardiology, and how he got into biotech

    06:23 Eric’s experience incubating and spinning out early-stage companies with Third Rock Ventures and developing Maze Therapeutics

    09:13 Eric’s decision to transition from academia to the world of biotech

    11:24 Building Maze Therapeutics and Eric’s focus on and genetic modifiers to discover new drugs

    15:09 The growth of therapeutic modalities in the context of genetics and gene therapies

    16:48 What led Eric to launch Trace Neuroscience to develop ALS therapies

    28:35 The process of getting Trace’s ALS therapies into the clinic

    32:22 The identification of therapeutic value in low odds ratio genes

    35:58 Eric’s view on the APOA1 gene target and its major effect size in kidney disease

    40:03 How best to integrate genetics and genetic discovery into small and medium biotechs

    41:50 Closing remarks

    Find out more

    •

    Trace Neuroscience

    •

    https://www.businesswire.com/news/home/20260622451252/en/Trace-Neuroscience-Initiates-Global-Clinical-Development-Program-for-TRCN-1023-an-Antisense-Oligonucleotide-Designed-to-Restore-UNC13A-Function-for-the-Treatment-of-ALS

    44 min
  20. EP 244: Building the first n-of-1 ASO: The new frontier of rare disease with Timothy Yu of Boston Children’s Hospital

    Show notes

    This week on The Genetics Podcast, Patrick is joined by Dr. Timothy Yu, Associate Professor of Pediatrics at Harvard Medical School and Physician/Researcher at Boston Children’s Hospital. They discuss how one child’s hidden genetic mutation led Tim into individualized ASO medicine, what it takes to develop n-of-1 therapies, and how new regulatory frameworks could expand treatment options for children with ultra-rare genetic disease.

    Show Notes

    0:00 Intro to The Genetics Podcast

    01:00 Welcome to Tim

    02:05 How uncovering the genetic mutation underlying an ultra-rare disease led Tim into personalized ASO medicine

    07:38 Challenges in developing a custom ASO

    12:25 How Tim’s team has scaled individualized ASO therapies to reach more than 50 patients worldwide

    16:18 Measuring clinical benefit in n-of-1 therapies with natural history data, wearables, and biomarkers

    20:24 How the N-of-1 Collaborative helps rare disease researchers share infrastructure

    24:28 Comparing ASOs, base editing, and prime editing for individualized rare disease therapies

    30:06 Finding scalable models for n-of-1 therapies in newborn genetic disease

    33:52 The potential impact of the FDA’s Plausible Mechanism framework on bespoke therapies

    36:58 Connecting rapid newborn genome sequencing to earlier treatment for rare genetic disease

    42:10 Closing remarks

    44 min

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